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Systematic analysis of how sequence affects alpha- to-beta structural switching in a straightforward designed peptide system

ReferenceB17958
Principal Investigator / Supervisor Professor Dek Woolfson
Co-Investigators /
Co-Supervisors
Institution University of Sussex
DepartmentBiology and Environmental Science
Funding typeResearch
Value (£) 226,672
StatusCompleted
TypeResearch Grant
Start date 17/02/2003
End date 16/08/2005
Duration30 months

Abstract

We have designed peptides that switch from alpha-helical coiled coils to beta-structured fibrils (amyloid). The work raised several issues. Particularly, how does sequence affect such conformational transitions? Is it passive? i.e., is amyloid formation largely a backbone phenomenon? Or does sequence play a more active role? If so, do certain sequences bias the unfolded state towards nascent beta- structure? Or, are specific side-chain interactions made that assist amyloid formation? These questions will be addressed by combining iterative protein design, peptide synthesis and biophysical characterisations. Our overall objective is to understand the factors that contribute to conformational switching in peptides and proteins. However, the work may also aid the design of peptides for applications in nanobiotechnology.

Summary

unavailable
Committee Closed Committee - Biomolecular Sciences (BMS)
Research TopicsX – not assigned to a current Research Topic
Research PriorityX – Research Priority information not available
Research Initiative X - not in an Initiative
Funding SchemeX – not Funded via a specific Funding Scheme
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