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Dynamic Integration of Functional Genomics Data

Reference	BBS/E/J/0000A197
Principal Investigator / Supervisor	Mr Sean Walsh
Co-Investigators / Co-Supervisors	Professor Richard Morris
Institution	John Innes Centre
Department	John Innes Centre Department
Funding type	Research
Value (£)	146,542
Status	Completed
Type	Institute Project
Start date	01/06/2005
End date	31/05/2008
Duration	36 months

Abstract

Genome annotation has relied heavily on homology matching to assign putative function to genes. In the post-genome era, there are many other datasets from systematic experimental analysis of the transcriptome, proteome, metabolome, complexome and in silico analysis of textome, genome and protein structure databases which can be exploited for functional inferences. This project will exploit data from these sources and build a system which dynamically integrates these datasets in a distributed computing environment. We will build upon existing bioinformatics resources for the model organisms Arabidopsis thaliana and Streptomyces coelicolor.

Summary

unavailable

Committee	Closed Committee - Plant & Microbial Sciences (PMS)
Research Topics	Microbiology, Plant Science
Research Priority	X – Research Priority information not available
Research Initiative	X - not in an Initiative
Funding Scheme	X – not Funded via a specific Funding Scheme

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