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Dynamic integration of functional genomics data
Reference
BBS/B/13829
Principal Investigator / Supervisor
Mr Sean Walsh
Co-Investigators /
Co-Supervisors
Institution
John Innes Centre
Department
Biological Chemistry
Funding type
Research
Value (£)
254,030
Status
Completed
Type
Research Grant
Start date
01/06/2005
End date
31/05/2008
Duration
36 months
Abstract
Genome annotation has relied heavily on homology matching to assign putative function to genes. In the post-genome era, there are many other datasets from systematic experimental analysis of the transcriptome, proteome, metabolome, complexome and in silico analysis of textome, genome and protein structure databases which can be exploited for functional inferences. This proposal would exploit data from these sources and build a system which dynamically integrates these datasets in a distributed computing environment. We will build upon existing bioinformatics resources for the model organisms Arabidopsis thaliana and Streptomyces coelicolor.
Summary
unavailable
Committee
Closed Committee - Plant & Microbial Sciences (PMS)
Research Topics
Microbiology, Plant Science
Research Priority
X – Research Priority information not available
Research Initiative
Bioinformatics and E Science Programme II (BEP2) [2003-2004]
Funding Scheme
X – not Funded via a specific Funding Scheme
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