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Mouse to Arabidopsis: transkingdom approaches to discovery of imprinted genes and analysis of genomic context

ReferenceBBS/B/05532
Principal Investigator / Supervisor Professor Roderick Scott
Co-Investigators /
Co-Supervisors
Professor Laurence Hurst, Dr Gavin Kelsey, Professor Rebecca Oakey
Institution University of Bath
DepartmentBiology and Biochemistry
Funding typeResearch
Value (£) 366,548
StatusCompleted
TypeResearch Grant
Start date 01/04/2004
End date 31/03/2007
Duration36 months

Abstract

Imprinting is an epigenetic mechanism regulating parent-specific gene expression and is crucial in reproduction for mammals and flowering plants. In mammals imprinting breakdown is linked to disease and cloning failure; in plants imprinting affects agronomic traits such as seed size and breeding barriers. There are many imprinted genes known in mouse but few in plants. We aim to 1) discover novel imprinted genes in the model plant Arabidopsis using molecular and bioinformatics techniques successful in mouse; 2) develop bioinformatics tools to extend analysis of mouse sequence, expression, and epigenetic data and apply this to Arabidopsis; 3) begin to compare genomic sequence and epigenetic features of imprinting across the two kingdoms.

Summary

unavailable
Committee Closed Committee - Genes & Developmental Biology (GDB)
Research TopicsX – not assigned to a current Research Topic
Research PriorityX – Research Priority information not available
Research Initiative Integrated Epigenetics (EPI) [2003]
Funding SchemeX – not Funded via a specific Funding Scheme
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