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Computational analysis of nucleosome positioning

ReferenceB18708
Principal Investigator / Supervisor Professor Christopher Hunter
Co-Investigators /
Co-Supervisors
Institution University of Sheffield
DepartmentChemistry
Funding typeResearch
Value (£) 178,144
StatusCompleted
TypeResearch Grant
Start date 01/06/2003
End date 31/05/2006
Duration36 months

Abstract

We propose to develop a computational method for predicting nucleosome positioning sites on DNA. The proposal builds on a successful programme for predicting the sequence-dependent structure of naked DNA, extending that approach to protein-DNA complexes. The key to the analysis is calculation of the energy required to bend DNA into a nuclesome bound conformation. The size of this structure represents a major challenge, but it is a system for which excellent experimental data is available for validation of the method. Since the nucleosome complex is the substrate for all DNA processing proteins in the nucleus of eukaryotes, the results have potential implications in many different fields.

Summary

unavailable
Committee Closed Committee - Biomolecular Sciences (BMS)
Research TopicsX – not assigned to a current Research Topic
Research PriorityX – Research Priority information not available
Research Initiative X - not in an Initiative
Funding SchemeX – not Funded via a specific Funding Scheme
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